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It looks like vseCheck.R is used to produce the visualizations used in the documentation, like .
This appears to be a way to install the R packages (but perhaps not the best way?):
$ R
> install.packages("scatterD3")
> install.packages("data.table")
$ sudo mv /tmp/Rtmp-X49N6W-or-whatever/downloaded_packages/* /usr/local/lib/R/site-library
Then, trying to reproduce the figures yields this:
$ R -f vseCheck.R
Error in fread("target4.csv") :
File 'target4.csv' does not exist. Include one or more spaces to consider the input a system command.
So I'm guessing we need that file also, perhaps among other things.
Any other tips on reproducing (and customizing!) the output would be great.
Thanks!
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