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Remove the spherical harmonics library and (unused) programs that depend on it. (fixes #1329)#1330

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biochem-fan merged 1 commit intover5.0from
remove-sh
Feb 27, 2026
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Remove the spherical harmonics library and (unused) programs that depend on it. (fixes #1329)#1330
biochem-fan merged 1 commit intover5.0from
remove-sh

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@scheres
Could you please confirm the files I deleted?

I deleted the whole of src/jaz/tomography/manifold and src/jaz/membrane. Probably some functions can be preserved, only deleting the SH related includes, but I guessed they are all unmaintained and unused.

@biochem-fan biochem-fan requested a review from scheres February 23, 2026 10:56
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The document refers to Manifold set
https://relion.readthedocs.io/en/release-5.0/Reference/STA/Datatypes/manifold_set.html and relion_tomo_fit_blobs_3d. I am getting uncertain if they are really unnecessary.

@biochem-fan biochem-fan merged commit f2c1a38 into ver5.0 Feb 27, 2026
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Confirmed by @scheres by email.

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