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Modify significance statistic handling#259

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stemangiola merged 5 commits intomasterfrom
change-default-statistics-plotting
Feb 23, 2026
Merged

Modify significance statistic handling#259
stemangiola merged 5 commits intomasterfrom
change-default-statistics-plotting

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  • Incremented package version to 2.1.26.
  • Changed default value of significance_statistic in plotting functions from "FDR" to "pH0" for improved clarity in significance interpretation.
  • Updated documentation and function parameters to reflect the new default and ensure consistency across plotting functions.
  • Enhanced user messaging to inform about the change in default significance statistic for boxplots.

- Incremented package version to 2.1.26.
- Changed default value of `significance_statistic` in plotting functions from "FDR" to "pH0" for improved clarity in significance interpretation.
- Updated documentation and function parameters to reflect the new default and ensure consistency across plotting functions.
- Enhanced user messaging to inform about the change in default significance statistic for boxplots.
- Changed the default parameter name from `colour_by` to `significance_statistic` to enhance clarity.
- Updated documentation to reflect the new default and provide clearer guidance on the significance statistics used for coloring significant groups.
@stemangiola stemangiola merged commit be6da99 into master Feb 23, 2026
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