A transformer model for de novo sequencing of data-independent acquisition mass spectrometry data
If you use Cascadia in your work, please cite the following publication:
Sanders, J., Wen, B., Rudnick, P.A. et al. A transformer model for de novo sequencing of data-independent acquisition mass spectrometry data. Nat Methods 22, 1447–1453 (2025). https://doi.org/10.1038/s41592-025-02718-y
Documentation for Cascadia is avaialable at: https://cascadia.readthedocs.io/en/latest/index.html