Standardised access to Identifier Mappings

<script type="application/ld+json"> { "@context": "http://schema.org", "@type": "SoftwareApplication", "http://purl.org/dc/terms/conformsTo": { "@type": "CreativeWork", "@id": "https://bioschemas.org/profiles/ComputationalTool/1.0-RELEASE/" }, "name": "BridgeDb", "@id": "https://bridgedb.org/", "url": "https://bridgedb.org/", "description": "Identifier Mapping Services for Genes, Proteins, Metabolites, Interactions, Diseases, Complexes, Publications, and more!", "citation": "https://doi.org/10.1186/1471-2105-11-5", "license": "https://spdx.org/licenses/Apache-2.0", "applicationCategory": "Computational science tool", "operatingSystem": ["Linux", "Windows", "Mac"] } </script>

BridgeDb is a framework to map identifiers between various biological databases and related resources. These mappings are provided for genes, proteins, metabolites, metabolic reactions, diseases, complexes and publications. BridgeDb includes a Java library that provides an API for programmatic access.

Framework and libraries	Identifier Mapping Databases	Tutorials and Workflows
Webservice and API	Webservice implementation Docker and semantic web	Documentation
Collaborators	Contact us	How to cite

Contributing organisations